BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B09SP1|AL430498
(384 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 686 0.0
>3x_Contig1807
Length = 66587
Score = 686 bits (333), Expect = 0.0
Identities = 362/385 (94%), Gaps = 1/385 (0%)
Strand = Plus / Plus
Query: 1 aaggaaaggmactgaagatgcgtttaattttttaccattatcgaataggcctacagtagc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23239 aaggaaaggcactgaagatgcgtttaattttttaccattatcgaataggcctacagtagc 23298
Query: 61 gagatagttaataatgtcagtatcatgtgtgaaa-ttaaccaaactttttggtccaactc 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 23299 gagatagttaataatgtcagtatcatgtgtgaaacttaaccaaactttttggtccaactc 23358
Query: 120 atcgctttgttttagtaattccactkakgcattkaacagtaaakaccctatcggctttgc 179
||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||
Sbjct: 23359 atcgctttgttttagtaattccactgaggcattgaacagtaaagaccctatcggctttgc 23418
Query: 180 taaakagtgaccaggaccatcttkgtagtagtcatatakatyatcctcatatkadaaktk 239
|||| |||||||||||||||||| |||||||||||||| || |||||||||| | || |
Sbjct: 23419 taaagagtgaccaggaccatcttggtagtagtcatatagatcatcctcatatgaaaagtg 23478
Query: 240 takcakttckkcktcaktkaatatattacatkcgtcactgtagcctttaacgctgatttc 299
|| || ||| | ||| | |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 23479 tagcagttcggcgtcagtgaatatattacatgcgtcactgtagcctttaacgctgatttc 23538
Query: 300 aaacccacaccacacgaacaaagagctggcatcggtagcagtcaaattcaaaggcaaatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23539 aaacccacaccacacgaacaaagagctggcatcggtagcagtcaaattcaaaggcaaatt 23598
Query: 360 cttattctcattgtttaatctktca 384
||||||||||||||||||||| |||
Sbjct: 23599 cttattctcattgtttaatctgtca 23623
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1953
Number of Sequences: 1807
Number of extensions: 1953
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 384
length of database: 10,358,551
effective HSP length: 15
effective length of query: 369
effective length of database: 10,331,446
effective search space: 3812303574
effective search space used: 3812303574
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.4 bits)